BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034F09LP1|AL429934
(846 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1762 1674 0.0
>3x_Contig1762
Length = 22098
Score = 1674 bits (844), Expect = 0.0
Identities = 845/846 (99%)
Strand = Plus / Minus
Query: 1 gatctgcttagaacattgtatattcaattgttccactttaagtactgaactgtacagttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5969 gatctgcttagaacattgtatattcaattgttccactttaagtactgaactgtacagttt 5910
Query: 61 cgactgggtccaatggtgaggtccacttttacaacctaaaatttgcttccagactcaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5909 cgactgggtccaatggtgaggtccacttttacaacctaaaatttgcttccagactcaaat 5850
Query: 121 gatactttgaaacccagtaaaaaaactctagtattttagggtaatacgtaaagcacaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5849 gatactttgaaacccagtaaaaaaactctagtattttagggtaatacgtaaagcacaaaa 5790
Query: 181 cgtttcataacaacaaaaccagcgcaaccgacactaacacaagcatctaaaatatgcacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5789 cgtttcataacaacaaaaccagcgcaaccgacactaacacaagcatctaaaatatgcacg 5730
Query: 241 atgtgtgtcctttaccatggattcatcgaagagctttatccgtatcacgtttattatgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5729 atgtgtgtcctttaccatggattcatcgaagagctttatccgtatcacgtttattatgat 5670
Query: 301 acaaatattgcatcatctcatacgtcacagatatcttagcatctcatcgcaattatataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5669 acaaatattgcatcatctcatacgtcacagatatcttagcatctcatcgcaattatataa 5610
Query: 361 ttcaaagttgtaccgttacttctattattatttttggtttggccctttttttttctctca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5609 ttcaaagttgtaccgttacttctattattatttttggtttggccctttttttttctctca 5550
Query: 421 aagggctaaaatgaattaaaaccagaaaaaaagaacttctaactggagaattgttgcaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5549 aagggctaaaatgaattaaaaccagaaaaaaagaacttctaactggagaattgttgcaat 5490
Query: 481 ttacataacacacttgatggcaaagtaatctttaattcggtataagtttagacctttcga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5489 ttacataacacacttgatggcaaagtaatctttaattcggtataagtttagacctttcga 5430
Query: 541 gagttcctatttcaatatatatctgtactcttaagagataagtcacaagtaaaaaaaacg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5429 gagttcctatttcaatatatatctgtactcttaagagataagtcacaagtaaaaaaaacg 5370
Query: 601 aaatactaattttaaagaagtgttcttttttagaaacggagaacgattgtkaattatttt 660
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5369 aaatactaattttaaagaagtgttcttttttagaaacggagaacgattgttaattatttt 5310
Query: 661 acttggacataattaaaccaggagataaagaacaaaattgaggaattaacgtctaatctt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5309 acttggacataattaaaccaggagataaagaacaaaattgaggaattaacgtctaatctt 5250
Query: 721 ctagtttccatccgagagataaggtacaactattgatatcaattactgagataacagagc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5249 ctagtttccatccgagagataaggtacaactattgatatcaattactgagataacagagc 5190
Query: 781 gagaaaattagaactataacgagtaagaacaaaaaatggtcgaatatactttcacctggc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5189 gagaaaattagaactataacgagtaagaacaaaaaatggtcgaatatactttcacctggc 5130
Query: 841 caaagg 846
||||||
Sbjct: 5129 caaagg 5124
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8327
Number of Sequences: 1807
Number of extensions: 8327
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 846
length of database: 10,358,551
effective HSP length: 16
effective length of query: 830
effective length of database: 10,329,639
effective search space: 8573600370
effective search space used: 8573600370
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)